Atlas II: every transfer in and out, fees paid and earned, squad market value.
| Date | Player | From | To | Fee |
|---|---|---|---|---|
| 2019-07-01 | Diego Barbosa | Atlas II | Atlas | — |
| 2018-07-01 | Diego Barbosa | Atlas II | Dorados Sinaloa | Loan |
| 2018-01-01 | José Hernández | Atlas II | Atlas | — |
| 2017-07-01 | José Hernández | Atlas U20 | Atlas II | — |
| 2017-07-01 | Diego Barbosa | Atlas U20 | Atlas II | — |
| 2016-07-01 | José Hernández | Atlas U20 | Atlas II | Loan |
| 2016-01-01 | Rivaldo Lozano | Atlas II | Atlas U17 | — |
| 2015-07-01 | Édgar Zaldívar | Atlas II | Académicos | — |
| 2015-07-01 | Rivaldo Lozano | Unknown | Atlas II | — |
| 2014-07-01 | Édgar Zaldívar | Atlas U17 | Atlas II | — |
| 2014-01-01 | José Hernández | Atlas II | Atlas U17 | — |
| 2013-07-01 | Gaddi Aguirre | Atlas II | Atlas U17 | — |
| 2013-07-01 | Diego Barbosa | Atlas II | Atlas U17 | — |
| 2013-07-01 | Brayan Garnica | Atlas II | Atlas U17 | — |
| 2013-01-01 | Luis Reyes | Atlas II | Académicos | — |
| 2012-07-01 | José Hernández | Atlas Jgd. | Atlas II | — |
| 2012-07-01 | Gaddi Aguirre | Atlas Jgd. | Atlas II | — |
| 2012-07-01 | Diego Barbosa | Atlas Jgd. | Atlas II | — |
| 2012-07-01 | Brayan Garnica | Atlas Jgd. | Atlas II | — |
| 2012-01-01 | Juan Pablo Vigón | Atlas II | Atlas U20 | — |