Alajuelense II: every transfer in and out, fees paid and earned, squad market value.
| Date | Player | From | To | Fee |
|---|---|---|---|---|
| 2025-07-01 | Kenyel Michel | Alajuelense II | LD Alajuelense | — |
| 2024-09-17 | Kenyel Michel | Alajuelense II | Cartaginés | Loan |
| 2024-07-01 | Jeyland Mitchell | Alajuelense II | LD Alajuelense | — |
| 2024-01-01 | Jeyland Mitchell | Liberia | Alajuelense II | Free |
| 2022-09-20 | Edward Cedeño | Potros del Este | Alajuelense II | Loan |
| 2022-07-01 | Kenyel Michel | Alajuelense U17 | Alajuelense II | — |
| 2021-07-01 | Santiago van der Putten | Alajuelense II | LD Alajuelense | — |
| 2021-07-01 | Josimar Alcócer | Alajuelense II | LD Alajuelense | — |
| 2021-01-01 | Santiago van der Putten | Saprissa Juv. | Alajuelense II | Free |
| 2021-01-01 | Aarón Suárez | Alajuelense II | LD Alajuelense | — |
| 2020-07-01 | Josimar Alcócer | Alajuelense II | Juv. Escazuceña | Loan |
| 2020-07-01 | Carlos Mora | Alajuelense II | LD Alajuelense | — |
| 2020-07-01 | Brandon Aguilera | Alajuelense II | LD Alajuelense | — |
| 2020-07-01 | Aarón Suárez | Alajuelense II | Juv. Escazuceña | Loan |
| 2020-06-30 | Aaron Murillo | Guadalupe FC | Alajuelense II | Loan |
| 2020-01-01 | Josimar Alcócer | Alajuelense U17 | Alajuelense II | — |
| 2019-07-01 | Carlos Mora | Once de Abril | Alajuelense II | — |
| 2019-07-01 | Brandon Aguilera | AD Carmelita | Alajuelense II | Free |
| 2019-07-01 | Aarón Suárez | Saprissa Juv. | Alajuelense II | — |
| 2018-07-01 | Alonso Martínez | Alajuelense II | LD Alajuelense | — |