Flora II (Esiliiga A): every transfer in and out, fees paid and earned, squad market value.
| Date | Player | From | To | Fee |
|---|---|---|---|---|
| 2025-02-21 | Johannes Lillemets | Flora II | Nõmme Kalju | Free |
| 2025-01-15 | Markus Johannes Leivategija | Flora II | Kuressaare | Free |
| 2025-01-15 | Sten Patrick Prunn | Flora II | Kuressaare | Loan |
| 2025-01-01 | Sander Tovstik | Flora II | Flora | Free |
| 2025-01-01 | Mark Kukk | Flora II | Flora | Free |
| 2025-01-01 | Andero Kaares | Flora II | Flora | Free |
| 2025-01-01 | Enriko Kajari | Flora II | Tallinna Kalev | Free |
| 2024-07-01 | Gregor Roivassepp | Flora II | Flora | Free |
| 2024-03-01 | Sten Marten Viira | Flora II | Harju Jalgpallikool | Free |
| 2024-02-18 | Bruno Vain | Flora II | Nõmme United | Free |
| 2024-02-05 | Kristofer Robin Grün | Flora II | Kuressaare | Loan |
| 2024-01-01 | Sander Tovstik | Viimsi | Flora II | Free |
| 2024-01-01 | Karl Orren | Flora II | Kuressaare | Free |
| 2024-01-01 | Mattias Männilaan | Flora II | Flora | Free |
| 2024-01-01 | Silver Rebane | Flora II | Flora | Free |
| 2024-01-01 | Roland Lukas | Flora II | Flora | Free |
| 2024-01-01 | Player | Flora II | Flora | Free |
| 2024-01-01 | Enriko Kajari | Flora II | Tallinna Kalev | Loan |
| 2023-07-09 | Karl Orren | Flora II | Kuressaare | Loan |
| 2023-07-01 | Robert Veering | Flora II | Flora | Free |