Independiente (Copa Libertadores): every transfer in and out, fees paid and earned, squad market value and €76k earned.
| Date | Player | From | To | Fee |
|---|---|---|---|---|
| 2026-08-05 | Player | Independiente | Conquense | Free |
| 2026-07-24 | Player | Árabe Unido | Independiente | Free |
| 2026-07-08 | Player | Independiente | Fuerte San Francisco | Free |
| 2026-07-02 | Rafael Águila | Independiente | Firpo | Free |
| 2026-07-01 | Player | Independiente | TBC | Free |
| 2026-07-01 | Player | Independiente | TBC | Free |
| 2026-07-01 | Jair Modelo | Independiente | Sheriff | Free |
| 2026-07-01 | Player | Independiente | San Francisco | Free |
| 2026-03-06 | Víctor Manuel Ávila Reyes | Independiente | Deportivo Universitario | Free |
| 2025-07-12 | Víctor Manuel Ávila Reyes | CD Macará | Independiente | Free |
| 2025-07-03 | Player | Veraguas | Independiente | Free |
| 2025-07-01 | Player | Independiente | TBC | Free |
| 2025-07-01 | Player | Herrera | Independiente | Free |
| 2025-07-01 | Eddie Roberts | Independiente | Estudiantes Mérida | Loan |
| 2025-03-10 | Player | Independiente | Deportivo Universitario | Free |
| 2025-03-06 | J. Aguilar | Independiente | San Antonio FC | Free |
| 2025-01-31 | Player | Independiente | New York RB II | Loan |
| 2025-01-14 | L. Fields | Independiente | Real Cartagena | Free |
| 2025-01-12 | Player | Independiente | Motagua | Free |
| 2025-01-08 | Rafael Águila | Independiente | Marathón | Free |